Cas13d guide design



Other organisms (coming soon)

Custom sequence input

Mouse gene Cas13d guide efficiency (GRCm39)

Here, we have predicted guide efficiency for all mouse Refseq genes.

  • To access the whole data file containing guide efficiency and information for all possible guides for all genes, please visit "Mouse_all" and download the files.
  • To find the top 50 high efficiency guides for your gene of interest, please use the interface below:
This should match the RefSeq gene name.
Read our pre-print here:

Deep learning of Cas13 guide activity from high-throughput gene essentiality screening

Jingyi Wei, Peter Lotfy , Kian Faizi, Hugo Kitano, Patrick D. Hsu*, Silvana Konermann*